Marcus Zuber

Marcus Zuber

Current positions
  • Head of CL/CT-Laboratory setup, PhD Student
Field of research
  • Spectroscopic & cone beam CT/CL, Photon counting detectors, phase contrast imaging

 

Publications


  1. Tofu : a fast, versatile and user-friendly image processing toolkit for computed tomography
    Faragó, T.; Gasilov, S.; Emslie, I.; Zuber, M.; Helfen, L.; Vogelgesang, M.; Baumbach, T.
    2022. Journal of Synchrotron Radiation, 29 (3). doi:10.1107/S160057752200282X
  2. Inverted Hartmann mask made by deep X-ray lithography for single-shot multi-contrast X-ray imaging with laboratory setup
    Mikhaylov, A.; Vlnieska, V.; Khanda, A.; Bremer, S.; Zuber, M.; Henrique Pezzin, S.; Kunka, D.
    2022. Optics Express, 30 (6), 8494. doi:10.1364/OE.452114
  3. Self‐healing triggering mechanism in epoxy‐based material containing microencapsulated amino‐polysiloxane
    Da Costa, S. F.; Zuber, M.; Zakharova, M.; Mikhaylov, A.; Baumbach, T.; Kunka, D.; Pezzin, S. H.
    2022. Nano select, 3 (3), 577–593. doi:10.1002/nano.202100091
  4. Assessing the microstructure and in vitro degradation behavior of Mg-xGd screw implants using µCT
    Krüger, D.; Zeller-Plumhoff, B.; Wiese, B.; Yi, S.; Zuber, M.; Wieland, D. C. F.; Moosmann, J.; Willumeit-Römer, R.
    2021. Journal of magnesium and alloys. doi:10.1016/j.jma.2021.07.029
  5. Morphological determinants of bite force capacity in insects: a biomechanical analysis of polymorphic leaf-cutter ants
    Püffel, F.; Pouget, A.; Liu, X.; Zuber, M.; Kamp, T.; Roces, F.; Labonte, D.
    2021. Interface, 18 (182). doi:10.1098/rsif.2021.0424
  6. Fluid mechanics and rheology of the jumping spider body fluid
    Göttler, C.; Amador, G.; Kamp, T. van de; Zuber, M.; Böhler, L.; Siegwart, R.; Sitti, M.
    2021. Soft matter, 17 (22), 5532–5539. doi:10.1039/d1sm00338k
  7. Synchrotron-radiation computed tomography uncovers ecosystem functions of fly larvae in an Eocene forest
    Baranov, V.; Engel, M.; Hammel, J.; Hörnig, M.; Kamp, T. van de; Zuber, M.; Haug, J.
    2021. Palaeontologia electronica, Art.Nr. 24.1.a07. doi:10.26879/1129
  8. Drought-Induced Xylem Embolism Limits the Recovery of Leaf Gas Exchange in Scots Pine
    Rehschuh, R.; Cecilia, A.; Zuber, M.; Faragó, T.; Baumbach, T.; Hartmann, H.; Jansen, S.; Mayr, S.; Ruehr, N.
    2020. Plant physiology, 184 (2), 852–864. doi:10.1104/pp.20.00407
  9. Inkjet-printed triple cation perovskite absorbers for mechanically flexible high performance X-ray detectors
    Mescher, H.; Schackmar, F.; Eggers, H.; Abzieher, T.; Zuber, M.; Hamann, E.; Baumbach, T.; Richards, B. S.; Hernandez-Sosa, G.; Paetzold, U. W.; Lemmer, U.
    2020. M. Fiederle, A. Burger & S. A. Payne (Eds.), Hard X-Ray, Gamma-Ray, and Neutron Detector Physics XXII : 24 August-4 September 2020, online only, United States / Arnold Burger, Stephen A. Payne, Michael Fiederle, 9, SPIE. doi:10.1117/12.2568063
  10. Flexible Inkjet-Printed Triple Cation Perovskite X-ray Detectors
    Mescher, H.; Schackmar, F.; Eggers, H.; Abzieher, T.; Zuber, M.; Hamann, E.; Baumbach, T.; Richards, B. S.; Hernandez-Sosa, G.; Paetzold, U. W.; Lemmer, U.
    2020. ACS applied materials & interfaces, 12 (13), 15774–15784. doi:10.1021/acsami.9b14649
  11. Introducing Biomedisa as an open-source online platform for biomedical image segmentation
    Lösel, P. D.; Van de Kamp, T.; Jayme, A.; Ershov, A.; Faragó, T.; Pichler, O.; Tan Jerome, N.; Aadepu, N.; Bremer, S.; Chilingaryan, S. A.; Heethoff, M.; Kopmann, A.; Odar, J.; Schmelzle, S.; Zuber, M.; Wittbrodt, J.; Baumbach, T.; Heuveline, V.
    2020. Nature Communications, 11 (1), Article no: 5577. doi:10.1038/s41467-020-19303-w
  12. In situ speciation and spatial mapping of Zn products during pulsed laser ablation in liquids (PLAL) by combined synchrotron methods
    Reich, S.; Goettlicher, J.; Ziefuß, A.; Streubel, R.; Letzel, A.; Menzel, A.; Mathon, O.; Pascarelli, S.; Baumbach, T.; Zuber, M.; Gökce, B.; Barcikowski, S.; Plech, A.
    2020. Nanoscale, 12 (26), 14011–14020. doi:10.1039/D0NR01500H
  13. Cranial shape evolution of extant and fossil crocodile newts and its relation to reproduction and ecology
    Pogoda, P.; Zuber, M.; Baumbach, T.; Schoch, R. R.; Kupfer, A.
    2020. Journal of anatomy, 237 (2), 285–300. doi:10.1111/joa.13201
  14. Evaluation of the usefulness of serial combination processes for drying of apples
    Siebert, T.; Becker, A.; Bunzel, M.; Zuber, M.; Hamann, E.; Baumbach, T.; Karbstein, H. P.; Gaukel, V.
    2020. Drying technology, 38 (10), 1274–1290. doi:10.1080/07373937.2019.1637888
  15. Micro-CT visualization of structure development during freeze-drying processes
    Siebert, T.; Zuber, M.; Hamann, E.; Baumbach, T.; Karbstein, H. P.; Gaukel, V.
    2020. Drying technology, 38 (3), 376–384. doi:10.1080/07373937.2019.1572619
  16. Visualization of electrolyte flow in vanadium redox flow batteries using synchrotron X-ray radiography and tomography – Impact of electrolyte species and electrode compression
    Bevilacqua, N.; Eifert, L.; Banerjee, R.; Köble, K.; Faragó, T.; Zuber, M.; Bazylak, A.; Zeis, R.
    2019. Journal of power sources, 439, 227071. doi:10.1016/j.jpowsour.2019.227071
  17. A comparison of customized Hartmann and newly introduced inverted Hartmann masks for single-shot phase-contrast X-ray imaging
    Zakharova, M.; Reich, S.; Mikhaylov, A.; Vlnieska, V.; Zuber, M.; Engelhardt, S.; Baumbach, T.; Kunka, D.
    2019. EUV and X-ray Optics: Synergy between Laboratory and Space VI. Ed.: R. Hudec, Article no: 110320U, Society of Photo-optical Instrumentation Engineers (SPIE). doi:10.1117/12.2520723
  18. Novel multicomponent organic–inorganic WPI/gelatin/CaP hydrogel composites for bone tissue engineering
    Dziadek, M.; Kudlackova, R.; Zima, A.; Slosarczyk, A.; Ziabka, M.; Jelen, P.; Shkarina, S.; Cecilia, A.; Zuber, M.; Baumbach, T.; Surmeneva, M. A.; Surmenev, R. A.; Bacakova, L.; Cholewa-Kowalska, K.; Douglas, T. E. L.
    2019. Journal of biomedical materials research / A, 107 (11), 2479–2491. doi:10.1002/jbm.a.36754
  19. In-situ micro-CT scan of a carrot disc during freeze-drying
    Siebert, T.; Zuber, M.
    2019. doi:10.5445/IR/1000089000
  20. Revision of Trassedia (Hymenoptera: Ceraphronidae), an Evolutionary Relict With an Unusual Distribution
    Mikó, I.; Trietsch, C.; Kamp, T. van de; Masner, L.; Ulmer, J. M.; Yoder, M. J.; Zuber, M.; Sandall, E. L.; Baumbach, T.; Deans, A. R.
    2018. Insect Systematics and Diversity, 2 (6), 29 Seiten. doi:10.1093/isd/ixy015
  21. Visualization of crust formation during hot-air-drying via micro-CT
    Siebert, T.; Zuber, M.; Engelhardt, S.; Baumbach, T.; Karbstein, H. P.; Gaukel, V.
    2018. Drying technology, 37 (15), 1881–1890. doi:10.1080/07373937.2018.1539746
  22. A new megaspilid wasp from Eocene Baltic amber (Hymenoptera: Ceraphronoidea), with notes on two non-ceraphronoid families: Radiophronidae and Stigmaphronidae
    Mikó, I.; Kamp, T. van de; Trietsch, C.; Ulmer, J. M.; Zuber, M.; Baumbach, T.; Deans, A. R.
    2018. PeerJ, 6, e5174. doi:10.7717/peerj.5174
  23. Large-area full field x-ray differential phase-contrast imaging using 2D tiled gratings
    Schröter, T. J.; Koch, F. J.; Kunka, D.; Meyer, P.; Tietze, S.; Engelhardt, S.; Zuber, M.; Baumbach, T.; Willer, K.; Birnbacher, L.; Prade, F.; Pfeiffer, F.; Reichert, K.-M.; Hofmann, A.; Mohr, J.
    2017. Journal of physics / D, 50 (22), Art.Nr. 225401. doi:10.1088/1361-6463/aa6e85
  24. Large area gratings by x-ray LIGA dynamic exposure for x-ray phase-contrast imaging
    Schröter, T. J.; Koch, F.; Meyer, P.; Baumann, M.; Münch, D.; Kunka, D.; Engelhardt, S.; Zuber, M.; Baumbach, T.; Mohr, J.
    2017. Journal of micro/nanolithography, MEMS and MOEMS, 16 (1), 013501. doi:10.1117/1.JMM.16.1.013501
  25. On the origin and nature of the grating interferometric dark-field contrast obtained with low-brilliance x-ray sources
    Koenig, T.; Zuber, M.; Trimborn, B.; Farago, T.; Meyer, P. J.; Kunka, D.; Albrecht, F. W.; Kreuer, S.; Volk, T.; Fiederle, M.; Baumbach, T.
    2016. Physics in medicine and biology, 61 (9), 3427–3442. doi:10.1088/0031-9155/61/9/3427
  26. An investigation into the temporal stability of CdTe-based photon counting detectors during spectral micro-CT acquisitions
    Zuber, M.; Hamann, E.; Ballabriga, R.; Campbell, M.; Fiederle, M.; Baumbach, T.; Koenig, T.
    2015. Biomedical physics & engineering express, 1 (2), 025205. doi:10.1088/2057-1976/1/2/025205

Further Publications

Scientific Publications
  1. M. Zuber, M. Laaß, E. Hamann, S. Kretschmer, N. Hauschke, T. van de Kamp, T. Baumbach und T. Koenig. “Augmented laminography, a correlative 3D imaging method for revealing the inner structure of compressed fossils”. In: Scientific Reports 7 (27. Jan. 2017), S. 41413
  2. T. Schröter, F. J. Koch, D. Kunka, P. Meyer, S. Tietze, S. Engelhardt, M. Zuber, T. Baumbach, K. Willer, L. Birnbacher, F. Prade, F. Pfeiffer, K.-M. Reichert, A. Hofmann und J. Mohr. “Large-area full field x-ray differential phase-contrast imaging using 2D tiled gratings”. In: Journal of Physics D: Applied Physics 50.22 (2017), S. 225401
  3. B. Trimborn, P. Meyer, D. Kunka, M. Zuber, F. Albrecht, S. Kreuer, T. Volk, T. Baumbach und T. Koenig. “Imaging properties of high aspect ratio absorption gratings for use in preclinical x-ray grating interferometry”. In: Physics in Medicine and Biology 61.2 (2016), S. 527.
  4. T. Koenig, M. Zuber, B. Trimborn, T. Farago, P. Meyer, D. Kunka, F. Albrecht, S. Kreuer, T. Volk, M. Fiederle und T. Baumbach. “On the origin and nature of the grating interferometric dark-field contrast obtained with low-brilliance x-ray sources”. In: Physics in Medicine and Biology 61.9 (2016), S. 3427.
  5. R. Ballabriga, J. Alozy, M. Campbell, E. Frojdh, E. H. M. Heijne, T. Koenig, X. Llopart, J. Marchal, D. Pennicard, T. Poikela, L. Tlustos, P. Valerio, W. Wong und M. Zuber. “Review of hybrid pixel detector readout ASICs for spectroscopic X-ray imaging”. In: Journal of Instrumentation 11.1 (2016), P01007.
  6. M. Zuber, T. Koenig, R. Hussain, E. Hamann, R. Ballabriga, M. Campbell, A. Fauler, M. Fiederle und T. Baumbach. “Reducing the formation of image artifacts during spectroscopic micro-CT acquisitions”. In: SPIE Medical Imaging. International Society for Optics und Photonics, 2015, S. 94124X–94124X.
  7. E. Hamann, T. Koenig, M. Zuber, A. Cecilia, A. Tyazhev, O. Tolbanov, S. Procz, A. Fauler, M. Fiederle und T. Baumbach. “Investigation of GaAs: Cr Timepix assemblies under high flux irradiation”. In: J. Inst. 10.1 (2015), S. C01047
  8. E. Fröjdh, F. Bisello, M. Campbell, J. Damet, E. Hamann, T. Koenig, W. S. Wong und M. Zuber. “Spectral response of the energy-binning Dosepix ASIC coupled to a 300 µm silicon sensor under high fluxes of synchrotron radiation”. In: Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment 804 (21. Dez. 2015), S. 43–49.
  9. M. Zuber, T. Koenig, E. Hamann, A. Cecilia, M. Fiederle und T. Baumbach. “Characterization of a 2x3 Timepix assembly with a 500 µm thick silicon sensor”. In: J. Inst. 9.5 (2014), S. C05037.
  10. P. Vagovic, L. Sveda, Angelica Cecilia, Elias Hamann, Daniele Pelliccia, E. N. Gimenez, Dusan Korytar, K. M. Pavlov, Z. Zaprazny und Marcus Zuber. “X-ray Bragg magnifier microscope as a linear shift invariant imaging system: image formation and phase retrieval”. In: Optics express 22.18 (2014), S. 21508–21520.
  11. T. Koenig, M. Zuber, E. Hamann, A. Runz, M. Fiederle und T. Baumbach. “Pooling optimal combinations of energy thresholds in spectroscopic CT”. In: SPIE Medical Imaging. Bd. 9033. 2014, 90331A–90331A–12.
  12. T. Koenig, M. Zuber, E. Hamann, A. Cecilia, R. Ballabriga, M. Campbell, M. Ruat, L. Tlustos, A. Fauler, M. Fiederle und T. Baumbach. “How spectroscopic x-ray imaging benefits from inter-pixel communication”. In: Phys. Med. Biol. 59.20 (21. Okt. 2014), S. 6195
  13. E. Hamann, T. Koenig, M. Zuber, A. Cecilia, A. Tyazhev, O. Tolbanov, S. Procz, A. Fauler, T. Baumbach und M. Fiederle. “Performance of a Medipix3RX Spectroscopic Pixel Detector with a High Resistivity Gallium Arsenide Sensor”. In: IEEE Trans. Med. Imag. PP.99 (2014), S. 1–1.
  14. E. Frojdh, R. Ballabriga, M. Campbell, M. Fiederle, E. Hamann, T. Koenig, X. Llopart, D. de Paiva Magalhaes und M. Zuber. “Count rate linearity and spectral response of the Medipix3RX chip coupled to a 300 µm silicon sensor under high flux conditions”. In: J. Inst. 9.4 (22. Apr. 2014), S. C04028–C04028.
  15. A. S. Brogna, M. Balzer, S. Smale, J. Hartmann, D. Bormann, E. Hamann, A. Cecilia, M. Zuber, T. Koenig und A. Zwerger. “A fast embedded readout system for large-area Medipix and Timepix systems”. In: J. Inst. 9.5 (2014), S. C05047.
  16. K. Rink, U. Oelfke, M. Fiederle, M. Zuber und T. Koenig. “Investigating the feasibility of photon-counting K-edge imaging at high x-ray fluxes using nonlinearity corrections”. In: Med. Phys. 40.10 (2013), S. 101908.
  17. K. Rink, T. Koenig, M. Zuber, A. Zwerger, A. Fauler, M. Fiederle und U. Oelfke. “Saturation effects of CdTe photon counting detectors under high photon fluxes”. In: J. Inst. 8.1 (1. Jan. 2013), S. C01026.
  18. T. Koenig, E. Hamann, S. Procz, R. Ballabriga, A. Cecilia, M. Zuber, X. Llopart, M. Campbell, A. Fauler, T. Baumbach und M. Fiederle. “Charge Summing in Spectroscopic X-Ray Detectors With High-Z Sensors”. In: IEEE Trans. Nucl. Sci. 60.6 (Dez. 2013), S. 4713–4718.
  19. A. Cecilia, E. Hamann, T. Koenig, F. Xu, Y. Cheng, L. Helfen, M. Ruat, M. Scheel, M. Zuber und T. Baumbach. “High resolution 3D imaging of bump-bonds by means of synchrotron radiation computed laminography”. In: J. Inst. 8.12 (2013), S. C12029.
  20. M. Zuber, T. Koenig, E. Hamann, J. Butzer, A. Cecilia, M. Fiederle und U. Oelfke. “Synchrotron measurements of the energy response functions of CdTe Medipix2 MXR detectors with pixel pitches of 110 and 165 µm”. In: J. Inst. 7.12 (2012), S. C12018.
  21. T. Koenig, J. Schulze, M. Zuber, K. Rink, J. Butzer, E. Hamann, A. Cecilia, A. Zwerger, A. Fauler, M. Fiederle und U. Oelfke. “Imaging properties of small-pixel spectroscopic x-ray detectors based on cadmium telluride sensors”. In: Phys. Med. Biol. 57.21 (7. Nov. 2012), S. 6743–6759.
  22. T. Koenig, A. Zwerger, M. Zuber, P. Schuenke, S. Nill, E. Guni, A. Fauler, M. Fiederle und U. Oelfke. “On the energy response function of a CdTe Medipix2 Hexa detector”. In: Nucl. Instr. and Meth. A 648, Supplement 1 (21. Aug. 2011), S265–S268.
  23. T. Koenig, M. Zuber, A. Zwerger, P. Schuenke, S. Nill, A. Fauler, M. Fiederle und U. Oelfke. “A comparison of various strategies to equalize the lower energy thresholds of a CdTe Medipix2 hexa detector for X-ray imaging applications”. In: J. Inst. 6.1 (Jan. 2011), S. C01074.